🚀 Tool Spotlight: Python Optimal Transport (POT) Library
The POT library brings the power of optimal transport (OT) to Python, helping researchers compare and transform probability distributions efficiently. OT is a mathematical [...]
Featured Publication: METI: deep profiling of tumor ecosystems by integrating cell morphology and spatial transcriptomics
METI: deep profiling of tumor ecosystems by integrating cell morphology and spatial transcriptomics Recent advances in spatial transcriptomics (ST) have improved insights into the tumor [...]
Featured Dataset: Structural Basis for Self-Discrimination by Neoantigen-Specific TCRs
Structural Basis for Self-Discrimination by Neoantigen-Specific TCRs This study highlights the RNA sequencing and whole exome sequencing data associated with the investigation of a [...]
NEW! Patient Advocacy Resources Available on the Cancer Complexity Knowledge Portal
Patient advocates bring essential perspectives to cancer research and are involved in several consortia associated with the MC2 Center. To support their efforts, as [...]
New Team Science Seminar on October 16th!
Creating Diverse, Equitable, and Inclusive Teams Dr. LaKaija Johnson, Principal Scientist, Team Science October 16, 2024, 11:00 AM - Noon PT / 2:00 - [...]
Featured Dataset: Spatial transcriptomics of xenograft tumor tissues
This study aims to compare the epigenomes of different patient-derived models of colorectal cancer (PDO (Patient-Derived Organoid), PDX (Patient-Derived Xenograft), and PDOX (Patient-Derived Orthotopic [...]
Featured Dataset: Transcriptional dysregulation of BAHCC1 in melanoma [Cut & Tag]
Cut&Tag sequencing data from melanoma cells revealed that BAHCC1, a gene associated with Super-Enhancers (SE) and critical for cancer growth, is highly active compared [...]
Resource Management Documentation now available!
Updated and expanded resource management documentation has been added to the CCKP! This update adds several new sections: how to store your data in a [...]
2024 From Atlas to Practice Innovation Lab
September 23 - 27, 2024 in the Washington D.C Area The 2024 From Atlas to Practice Innovation Lab will bring together spatial biologists with practicing [...]
Publication Highlight: Combined KRAS-MAPK pathway inhibitors and HER2-directed drug conjugate is efficacious in pancreatic cancer
Guest Author: Ashenafi Bulle, Ph.D., Washington University School of Medicine in St. Louis In this work, we shed light on the significance of drug combinations [...]