🧰 Featured Tool: Cumulus
Cumulus helps researchers tackle one of single-cell genomics' biggest challenges: analyzing datasets too large for a laptop. It's a cloud-based framework for large-scale scRNA-seq and [...]
🚀New Tool: LinG3D: Visualizing the Spatio-Temporal Dynamics of Clonal Evolution
Tumors aren't genetically uniform, and which clones survive and why they survive has direct bearing on treatment resistance. LinG3D adds spatial context to lineage tracing. [...]
📈New Dataset: Single-cell RNA sequencing reveals different cellular states in malignant cells and the tumor microenvironment in primary and metastatic ER-positive breast cancer Gallery📈New Dataset: Single-cell RNA sequencing reveals different cellular states in malignant cells and the tumor microenvironment in primary and metastatic ER-positive breast cancer
📈New Dataset: Single-cell RNA sequencing reveals different cellular states in malignant cells and the tumor microenvironment in primary and metastatic ER-positive breast cancer
A new single-cell RNA-sequencing dataset provides in-depth profiling of estrogen receptor (ER)-positive primary and metastatic breast cancer tumors from 23 patients, offering insight into [...]
🧰 CCKP Toolkit Tool Feature: lifelines
Created and maintained by Cameron Davidson-Pilon, lifelines helps researchers answer “how long until something happens?” — whether that’s patient outcomes in cancer studies, subscriber [...]
📈New Dataset: Impact of post-lysis stopping point prior to reverse transcription
We’re excited to share the dataset “Impact of Post-Lysis Stopping Point Prior to Reverse Transcription,” generated using the newly developed particle-templated instant partition sequencing [...]
Meet your new Spatial Profiling Special Interest Group Chair
I am a recent PhD graduate from MIT's Department of Chemical Engineering, where I worked in the Blankschtein/Langer Labs on using low-frequency ultrasound [...]
🧰CCKP Toolkit Tool Feature: AMICI
AMICI (Advanced Multilanguage Interface for CVODES and IDAS) is a high-performance Python and C++ interface for solving large-scale ordinary and algebraic differential equation models. It provides [...]
Thanks and Farewell to the Image Analysis Special Interest Group
The Image Analysis Special Interest Group has sunset after seven years. BIG THANK YOU to our Outgoing Image Analysis Special Interest Group Chairs - Clarence [...]
🧰CCKP Toolkit Tool Feature: phangorn
phangorn is an R package for phylogenetic reconstruction and analysis. It supports Maximum Likelihood, Maximum Parsimony, distance-based methods, and Hadamard conjugation, enabling researchers to [...]
Meet your new Data Manager Operation Group Chairs!
From its launch, the Data Manager Operations Group has been led by Aditi Gopalan, Bioinformatics Engineer in the MC2 Center Team. We are so excited [...]